Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wgs alignment with qc

https://github.com/genome/cancer-genomics-workflow.git

Path: wgs_alignment.cwl

Branch/Commit ID: 8f21f80a504c7fb834af331715a0661707d25537
workflow graph transform.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/fastq_readgroup_stats/transform.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph chipseq-header.cwl

https://github.com/datirium/workflows.git

Path: metadata/chipseq-header.cwl

Branch/Commit ID: 0fef82b492e03b3588c5e487bd75919d0e936fde
workflow graph kb-tss-preprocess-all.cwl#align-texts-wf.cwl

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/kb-tss-preprocess-all.cwl

Branch/Commit ID: f946a40f63ed03692db7bc5c5bee796eb9432cdb

Packed ID: align-texts-wf.cwl
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/examples/1st-workflow.cwl

Branch/Commit ID: 622134ebc48980676b7e53fe39405c428920c03e
workflow graph 04-peakcall-se.cwl

ATAC-seq 04 quantification - SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl

Branch/Commit ID: 71146d85ae7f0c562ec0d454fbbb7085a827356e
workflow graph 02-trim-se.cwl

ATAC-seq 02 trimming - reads: SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: 71146d85ae7f0c562ec0d454fbbb7085a827356e
workflow graph 01-qc-se.cwl

ATAC-seq 01 QC - reads: SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: 71146d85ae7f0c562ec0d454fbbb7085a827356e
workflow graph seq_cache_workflow.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/seq_cache_workflow.cwl

Branch/Commit ID: c822e40575ecd7fc65626a73363f3bbc193b9a74
workflow graph bam-bedgraph-bigwig.cwl

Workflow converts input BAM file into bigWig and bedGraph files

https://github.com/datirium/workflows.git

Path: subworkflows/bam-bedgraph-bigwig.cwl

Branch/Commit ID: cf107bc24a37883ef01b959fd89c19456aaecc02