Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71
	scRNA-seq pipeline using Salmon and Alevin	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: pipeline.cwl Branch/Commit ID: fdde24c1c7bef16b727f26e7c98b6885c398550f
	Convert FastJs to cgfs	https://github.com/curoverse/l7g.git Path: cwl-version/masterworkflow/fastj2cgf-wf.cwl Branch/Commit ID: cdfe9178ad4e481d2391cd2da74b82d66a61b0bb
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines9-wf.cwl Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f
	idr.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/ChIP-Seq/idr.cwl Branch/Commit ID: e541470bc9d0b064bc4ed7dd2b45d8ec67760613
	Run genomic CMsearch	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49
	cmsearch-multimodel.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: 930a2cf6fff820c2461b42dd79d71d9379343013
	Cell Ranger Count Gene Expression Cell Ranger Count Gene Expression =================================	https://github.com/datirium/workflows.git Path: workflows/single-cell-preprocess-cellranger.cwl Branch/Commit ID: 1131f82a53315cca217a6c84b3bd272aa62e4bca
	bwa_pe.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/align/bwa_pe.cwl Branch/Commit ID: ac59a0523af18df87bfc45b26d4cb59a9e34bb7d