Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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workflow-blast-clustalo-phylogeny.cwl
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https://github.com/ebi-jdispatcher/webservice-cwl.git
Path: workflows/workflow-blast-clustalo-phylogeny.cwl Branch/Commit ID: master |
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PGAP Pipeline, simple user input, PGAPX-134
PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template) |
https://github.com/ncbi/pgap.git
Path: pgap.cwl Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36 |
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SetArrayElementCoordinates
Transform array element coordinates into the coordinate system required by the simulation pipeline (i.e., CORSIKA system). |
https://github.com/gammasim/workflows.git
Path: workflows/SetArrayElementCoordinates.cwl Branch/Commit ID: main |
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umi duplex alignment fastq workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/umi_duplex_alignment.cwl Branch/Commit ID: db0a91eb094d0a7c58042d4264986ea042dd4827 |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: low-vaf |
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exomeseq-00-prepare-reference-data.cwl
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https://github.com/Duke-GCB/bespin-cwl.git
Path: subworkflows/exomeseq-00-prepare-reference-data.cwl Branch/Commit ID: gatk4-fixes |
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tt_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: dev |
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no-inputs-wf.cwl
Workflow without inputs. |
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/no-inputs-wf.cwl Branch/Commit ID: main |
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CRAM_md5sum.cwl
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https://github.com/DataBiosphere/topmed-workflows.git
Path: CRAM-no-header-md5sum/md5sum/CRAM_md5sum.cwl Branch/Commit ID: 1.23.0 |
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strelka workflow
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https://github.com/mnneveau/cancer-genomics-workflow.git
Path: strelka/workflow.cwl Branch/Commit ID: master |
