Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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1st-workflow.cwl
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https://github.com/common-workflow-language/user_guide.git
Path: _includes/cwl/22-nested-workflows/1st-workflow.cwl Branch/Commit ID: 5d2a28c83eb10747f3c605931a4dced4c49f3504 |
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createindex.cwl
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https://github.com/yyoshiaki/virtus.git
Path: workflow/createindex.cwl Branch/Commit ID: ff8ca6c87ad2c8fa2d1bc9a8bb4bca9c523826d6 |
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genomics-workspace-genome.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_genomicsWorkspace/genomics-workspace-genome.cwl Branch/Commit ID: 7198756b4b1519d102178042924671bd677e9b17 |
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Convert FastJs to npy arrays for gVCF input
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https://github.com/curoverse/l7g.git
Path: cwl-version/masterworkflow/fastj2npy-wf.cwl Branch/Commit ID: cdfe9178ad4e481d2391cd2da74b82d66a61b0bb |
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Create NumPy arrays by tile path from cgfs, merge all NumPy arrays into single array
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https://github.com/curoverse/l7g.git
Path: cwl-version/npy/createnpy-wf.cwl Branch/Commit ID: cdfe9178ad4e481d2391cd2da74b82d66a61b0bb |
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mutect parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 1750cd5cc653f058f521b6195e3bec1e7df1a086 |
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Workflow to validate the the gVCF to cgf conversion
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https://github.com/curoverse/l7g.git
Path: cwl-version/checks/check-cgf/gvcf/check-cgf-gvcf-wf.cwl Branch/Commit ID: cdfe9178ad4e481d2391cd2da74b82d66a61b0bb |
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import_include_test.cwl
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https://github.com/wshands/CWL1.2Test.git
Path: import_include_test.cwl Branch/Commit ID: c6b569882d4791ae28df4ee3b07a443e41fbff26 |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 0514ffe248dd11068a3f2268bc67b6ce5ab051d2 |
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gcaccess_from_list
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143 |