Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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umi duplex alignment workflow
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![]() Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 67f56d3b9c70ad56019ed8aa8d50a128e02be43b |
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main-prealign.cwl
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![]() Path: prealign/prealign-workflow/main-prealign.cwl Branch/Commit ID: d675318396ddf17fb886c058f5f17f8b0414f4cd |
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conditional_bamindex.cwl
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![]() Path: workflows/bamfastq_align/conditional_bamindex.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd |
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Filter Protein Alignments I
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![]() Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: a2ac3ce9fc09f9ed0c0db5644cbd9d1bca984b2a |
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wf-alignment.cwl
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![]() Path: SGDP-recall-CGC/SGDP-recall-cgc/wf-alignment.cwl Branch/Commit ID: a297e87e014de998b8df9c90700c29173ec09932 |
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BlastP_RBH_workflow
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![]() Path: blast-pipelines/blast_workflow.cwl Branch/Commit ID: aaef7f621d72e357fb957c92acf3e18c933b8ad1 |
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gp_makeblastdb
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![]() Path: progs/gp_makeblastdb.cwl Branch/Commit ID: f1d8909df368a704f094bf73fd734f34e3d7d36a |
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Preprocess fastq
Remove and trim low quality reads from fastq files. Return fasta files with reads passed and reads removed. |
![]() Path: CWL/Workflows/preprocess-fastq.workflow.cwl Branch/Commit ID: 6a8727124baf77416ca797982fd4e0689c2a593a |
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chksum_seqval_wf_interleaved_fq.cwl
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![]() Path: cwls/chksum_seqval_wf_interleaved_fq.cwl Branch/Commit ID: eed00bbabeae73ef7f00712da17861eade3b9057 |
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amplicon_metrics.cwl
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![]() Path: workflows/bamfastq_align/amplicon_metrics.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd |