Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph EMG pipeline v3.0 (draft CWL version)

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 3168316
workflow graph calibrator_sun.cwl

https://github.com/peijin94/LOFAR-Sun-tools.git

Path: utils/IM/LINC/lincSun/workflow/calibrator_sun.cwl

Branch/Commit ID: master
workflow graph snpeff-workflow.cwl

Annotate variants provided in a gziped VCF using SnpEff

https://github.com/andrewjesaitis/cwl-tutorial.git

Path: snpeff-workflow.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/EvolutionaryGenomics/scalability-reproducibility-chapter.git

Path: CWL/workflow.cwl

Branch/Commit ID: master
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: a8abd0e
workflow graph output-arrays-int-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/output-arrays-int-wf.cwl

Branch/Commit ID: main
workflow graph wf_calculate_models.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw2cwl_parser/example_sql/calculate_models/wf_calculate_models.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/inab/Wetlab2Variations.git

Path: cwl-workflows/demonstrator/workflow.cwl

Branch/Commit ID: master
workflow graph step-valuefrom3-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/step-valuefrom3-wf.cwl

Branch/Commit ID: main
workflow graph ChIP-seq peak caller workflow MACS2 based

This workflow execute peak caller and QC for ChIP-seq using MACS2

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/peak-calling-MACS2-genome-size.cwl

Branch/Commit ID: master