Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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pcr-bottleneck-coef.cwl
ChIP-seq - map - PCR Bottleneck Coefficients |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/map/pcr-bottleneck-coef.cwl Branch/Commit ID: dd2241dbbbc23abd91b5e6a18c139530e7ef8d2b |
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scatter-valuefrom-wf6.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/scatter-valuefrom-wf6.cwl Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8 |
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pipeline-pe-blacklist-removal.cwl
ATAC-seq pipeline - reads: PE - with blacklist removal |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/pipeline-pe-blacklist-removal.cwl Branch/Commit ID: 13826f526a99e151e9cf5f22e70bdcf4feea73f4 |
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extract_readgroups_bam.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroups_bam.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9 |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 7edbf07405191db65a913e311a7f2260b076d36c |
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extract_readgroup_fastq_se.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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count-lines10-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines10-wf.cwl Branch/Commit ID: f207d168f4e7eb4dd2279840d4062ba75d9c79c3 |
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Prepare user input
Prepare user input for NCBI-PGAP pipeline |
https://github.com/ncbi/pgap.git
Path: prepare_user_input2.cwl Branch/Commit ID: 66b5bc323dcd23e1b2c14bf4783babf0f15ca43b |
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04-quantification-se-unstranded.cwl
RNA-seq 04 quantification |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-se-unstranded.cwl Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd |
