Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph bam-bedgraph-bigwig.cwl

Workflow converts input BAM file into bigWig and bedGraph files

https://github.com/datirium/workflows.git

Path: subworkflows/bam-bedgraph-bigwig.cwl

Branch/Commit ID: cf107bc24a37883ef01b959fd89c19456aaecc02
workflow graph spiel.cwl

https://github.com/gijzelaerr/spiel.git

Path: spiel.cwl

Branch/Commit ID: e3ebfe0ac061c53c97c9d9af1f4c189f3ff9626e
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass1.cwl

Branch/Commit ID: 13b411d94a568e52797ba936732dc65f1a91bd41
workflow graph functional analysis prediction with InterProScan

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: 886df9de6713e06228d2560c40f451155a196383
workflow graph Assign Clade plane complete workflow

https://github.com/ncbi-gpipe/pgap.git

Path: clade_assign/wf_clade_assign.cwl

Branch/Commit ID: 71e3a42eadc007b66ef4689086530dfc3123d32f
workflow graph main-prealign.cwl

https://github.com/bcbio/test_bcbio_cwl.git

Path: prealign/prealign-workflow/main-prealign.cwl

Branch/Commit ID: 48ca2661644e01e2d4b7f8ad8f2588a31cf87537
workflow graph lobSTR-workflow.cwl

https://github.com/common-workflow-language/workflows.git

Path: workflows/lobSTR/lobSTR-workflow.cwl

Branch/Commit ID: 813eded687b41864703cfe802bb688ef8074732d
workflow graph megahit_pipeline.cwl

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: cwl/megahit_pipeline.cwl

Branch/Commit ID: 5a63f965d5809dab3a8f79b5e08361c30ede7900
workflow graph SSU-from-tablehits.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: ecf044f3a5a7589cb2238487a19f22863c2bcdb1
workflow graph BLAST against rRNA db

https://github.com/ncbi-gpipe/pgap.git

Path: bacterial_noncoding/wf_blastn.cwl

Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6