Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph black-diamond-workflow.cwl

https://github.com/ryantanaka/cwl-vs-dax-example.git

Path: black-diamond-workflow/cwl/black-diamond-workflow.cwl

Branch/Commit ID: master
workflow graph prefetch_fastq.cwl

Worfklow combining an SRA fetch from NCBI with a fastq-dump cmd

https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git

Path: bio-cwl-tools/sratoolkit/prefetch_fastq.cwl

Branch/Commit ID: master
workflow graph exomeseq-00-prepare-reference-data.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-00-prepare-reference-data.cwl

Branch/Commit ID: gatk4-fixes
workflow graph GRO_run.cwl

https://github.com/JFRudzinski/CWL_example.git

Path: test_workflow_notables_clean/workflow/GRO_run.cwl

Branch/Commit ID: master
workflow graph samtoolsW.cwl

Author: AMBARISH KUMAR er.ambarish@gmail.com; ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for genomic variant detection using VARSCAN. It is hoped to be effective and useful for getting SARS-CoV-2 genome variants. It uses Illumina RNASEQ reads and genome sequence.

https://github.com/ambarishK/bio-cwl-tools.git

Path: samtoolsW.cwl

Branch/Commit ID: release
workflow graph Run genomic CMsearch

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_gcmsearch.cwl

Branch/Commit ID: test
workflow graph msi.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/subworkflows/msi.cwl

Branch/Commit ID: master
workflow graph delay-calibration.cwl

https://github.com/lonbar/VLBI-cwl.git

Path: workflows/delay-calibration.cwl

Branch/Commit ID: master
workflow graph wf-loadContents4.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/wf-loadContents4.cwl

Branch/Commit ID: main
workflow graph Run genomic CMsearch (Rfam rRNA)

https://github.com/ncbi/pgap.git

Path: bacterial_ncrna/wf_gcmsearch.cwl

Branch/Commit ID: test