Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	genomel_cohort_genotyping.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/genomel_cohort_genotyping.cwl Branch/Commit ID: 7f01768479e6a77a5caf6b3382174aa038ba05fc
	Creates FASTA file from BED coordinates This workflow creates FASTA file from BED coordinates	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/fasta-from-bed.cwl Branch/Commit ID: 11f70a71cb68b3960c2d410ba1fdcd3b8a7e1419
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022
	samtools_view_sam2bam	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_view_sam2bam.cwl Branch/Commit ID: 1a8c6bc41c83476a5496bbaca5c3d870cfd8c21e
	genomics-workspace.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_genomicsWorkspace/genomics-workspace.cwl Branch/Commit ID: 89cff9f0d36a23bf57b3f4bdbd3ed57e3347c945
	CNV_FPS	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/workflow.cwl Branch/Commit ID: 548778e1733b1cac01ed2ec3d25a14bc484f3cbd
	bacterial_kmer	https://github.com/ncbi/pgap.git Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: 369afa7090a7480e6a0b144eff967a4a52b6fde2
	5S-from-tablehits.cwl	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: tools/5S-from-tablehits.cwl Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b
	alignment for nonhuman with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_wgs_nonhuman.cwl Branch/Commit ID: a08de598edc04f340fdbff76c9a92336a7702022
	count-lines8-wf.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/count-lines8-wf.cwl Branch/Commit ID: a0f2d38e37ff51721fdeaf993bb2ab474b17246b