Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome_metrics.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/exome_metrics.cwl Branch/Commit ID: 8edf6a5e4e7790434ad0742e50d0c97a5d0bb846 |
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conditional_bamindex.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/conditional_bamindex.cwl Branch/Commit ID: 20a901f44c9fb0e6f4ee3c40ec33fa4b1c8ef005 |
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etl.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/etl.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
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conditional_markduplicates.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/conditional_markduplicates.cwl Branch/Commit ID: 20a901f44c9fb0e6f4ee3c40ec33fa4b1c8ef005 |
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extract_amplicon_kit.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_amplicon_kit.cwl Branch/Commit ID: 8edf6a5e4e7790434ad0742e50d0c97a5d0bb846 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2 |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611 |
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fastq_clean_pe.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/fastq_clean_pe.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae |
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mirna_profiling.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
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mirna_profiling.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/mirna_profiling.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae |
