Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	abundance abundace profiles from annotated files, for protein and/or rna	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/abundance.workflow.cwl Branch/Commit ID: f906212e2c9a88280ae36545e5422f25752aa8f4
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2
	merge and annotate svs with population allele freq and vep	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2
	SV filtering workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_sv_vcf.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2
	stats.cwl	https://github.com/EBI-Metagenomics/CWL-assembly.git Path: cwl/stats/stats.cwl Branch/Commit ID: 202e51ac4bfe78d68af50af5ec9ae37bf380c7a7
	process VCF workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2
	module-1-2-chunk	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-1-2.chunk.cwl Branch/Commit ID: 72353a747f45ffe35863c3b6c70b28a676a97643
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1
	sum-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/sum-wf.cwl Branch/Commit ID: fd6e054510e2bb65eed4069a3a88013d7ecbb99c
	module-6	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-6.cwl Branch/Commit ID: 72353a747f45ffe35863c3b6c70b28a676a97643