Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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hisat2-stringtie_wf_pe.cwl
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![]() Path: workflows/hisat2-stringtie/paired_end/hisat2-stringtie_wf_pe.cwl Branch/Commit ID: e2528f4d7e4ba5664fc171f9a25fc1490ae27c91 |
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extract_capture_kit_http.cwl
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![]() Path: workflows/bamfastq_align/extract_capture_kit_http.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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default-wf5.cwl
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![]() Path: tests/wf/default-wf5.cwl Branch/Commit ID: cb81b22abc52838823da9945f04d06739ab32fda |
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screen out taxa
Remove sequences which align against a reference set using bowtie2. The references are preformatted (index files) |
![]() Path: CWL/Workflows/organism-screening.workflow.cwl Branch/Commit ID: 81feefc84ec0faecf1ade718001d5f07610e616e |
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pass-unconnected.cwl
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![]() Path: v1.0/v1.0/pass-unconnected.cwl Branch/Commit ID: 1f501e38ff692a408e16b246ac7d64d32f0822c2 |
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xenbase-rnaseq-se.cwl
XenBase workflow for analysing RNA-Seq single-end data |
![]() Path: workflows/xenbase-rnaseq-se.cwl Branch/Commit ID: 9a2c389364674221fab3f0f6afdda799e6aa3247 |
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dynresreq-workflow.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/dynresreq-workflow.cwl Branch/Commit ID: cb81b22abc52838823da9945f04d06739ab32fda |
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extract_readgroups_bam.cwl
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![]() Path: workflows/bamfastq_align/extract_readgroups_bam.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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exome alignment and germline variant detection
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![]() Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580 |
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1st-workflow.cwl
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![]() Path: cwltool/schemas/v1.0/examples/1st-workflow.cwl Branch/Commit ID: cb81b22abc52838823da9945f04d06739ab32fda |