Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Run pindel on provided region

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_region.cwl

Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d
workflow graph bams2gvcf.woBQSR_male.multisamples.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR_male.multisamples.cwl

Branch/Commit ID: a1c9cd63c80122d6a831059cdb73ec9a9455af6f
workflow graph exome alignment and somatic variant detection for cle purpose

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_cle.cwl

Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a
workflow graph workflow.cwl

https://github.com/mr-c/scalability-reproducibility-chapter.git

Path: CWL/workflow.cwl

Branch/Commit ID: 7795938377fba40e4bc5ac4735868d2c0e10bf8c
workflow graph downsample unaligned BAM and align

https://github.com/genome/cancer-genomics-workflow.git

Path: unaligned_bam_to_bqsr/downsample_workflow.cwl

Branch/Commit ID: d1ee6a2a323cee7e4af00c7e0b926c2192038e1d
workflow graph ani_top_n

https://github.com/ncbi/pgap.git

Path: task_types/tt_ani_top_n.cwl

Branch/Commit ID: 5331b0836aa7c451d759ef39dc2062000ac21a47
workflow graph kf_alignment_fq_input_wf.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kf_alignment_fq_input_wf.cwl

Branch/Commit ID: b8b1a96d015db74ea451bb7bf83a5e48e645ce1f
workflow graph fusion_simulation_workflow.cwl

Fusion Simulation Workflow

 https://github.com/Sage-Bionetworks/rnaseqSim.git

Path: workflow/fusion_simulation_workflow.cwl

Branch/Commit ID: f621d09c48a6abfd2c63105a2c096f39a1627a07
workflow graph kf-cram2gvcf-custom.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kf-cram2gvcf-custom.cwl

Branch/Commit ID: b8b1a96d015db74ea451bb7bf83a5e48e645ce1f
workflow graph taxonomy_check_16S

https://github.com/ncbi-gpipe/pgap.git

Path: task_types/tt_taxonomy_check_16S.cwl

Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143