Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph sc_atac_seq_prep_process_analyze.cwl

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/sc_atac_seq_prep_process_analyze.cwl

Branch/Commit ID: 68e0cc1
workflow graph pass-unconnected.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/pass-unconnected.cwl

Branch/Commit ID: master
workflow graph bam_collapsing.cwl

https://github.com/msk-access/bam_collapsing.git

Path: bam_collapsing.cwl

Branch/Commit ID: master
workflow graph wf-alignment.cwl

https://github.com/FarahZKhan/bcbio_test_cwl.git

Path: somatic/somatic-workflow/wf-alignment.cwl

Branch/Commit ID: master
workflow graph dedup-2-pass.cwl

run 2-pass dedup: algo LocusCollector + algo Dedup sequentially

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/dedup-2-pass.cwl

Branch/Commit ID: master
workflow graph alignment_workflow_md5checker.cwl

https://github.com/databiosphere/topmed-workflows.git

Path: aligner/topmed-cwl/workflow/alignment_workflow_md5checker.cwl

Branch/Commit ID: 1.32.0
workflow graph pulsar_timing_prototype_workflow.cwl

https://github.com/tmcantwell/pulsar_timing_prototype.git

Path: pulsar_timing_prototype_workflow.cwl

Branch/Commit ID: master
workflow graph 03-map-se.cwl

ATAC-seq 03 mapping - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl

Branch/Commit ID: v1.0.0
workflow graph word-mapping-dir.cwl#main

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/word-mapping-dir.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph alignment_prep.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_prep.cwl

Branch/Commit ID: master