Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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targeted alignment and low vaf variant detection
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/targeted_low_vaf_pipeline.cwl Branch/Commit ID: low-vaf |
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workflow.cwl
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https://github.com/AlexanderSenf/pipelines_intro.git
Path: cwl/workflow.cwl Branch/Commit ID: main |
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qa_check_subwf.cwl
This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs |
https://github.com/svonworl/oxog-dockstore-tools.git
Path: qa_check_subwf.cwl Branch/Commit ID: master |
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rhapsody_pipeline_2.0.cwl#VDJ_Preprocess_Reads.cwl
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https://github.com/Chi-CRL/cwl_check_workflow.git
Path: rhapsody_pipeline_2.0.cwl Branch/Commit ID: main Packed ID: VDJ_Preprocess_Reads.cwl |
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varscan somatic workflow
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https://github.com/hamid58b/cancer-genomics-workflow.git
Path: varscan/varscan.cwl Branch/Commit ID: master |
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WGSSomaticMultiCallers_1_4_0.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/WGSSomaticMultiCallers_1_4_0.cwl Branch/Commit ID: master |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: dev |
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any-type-compat.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/any-type-compat.cwl Branch/Commit ID: master |
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checker_workflow_wrapping_workflow.cwl
This demonstrates how to wrap a \"real\" workflow with a checker workflow that runs both the tool and a tool that performs verification of results |
https://github.com/dockstore-testing/dockstore-workflow-md5sum-unified.git
Path: checker_workflow_wrapping_workflow.cwl Branch/Commit ID: 1.3.0 |
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example_workflow.cwl
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https://github.com/Aeolic/example-workflow.git
Path: example_workflow.cwl Branch/Commit ID: main |
