Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 079ef6922a948be5ea95cc9a008584c97038c6ac
	workflow.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_md5checksums/workflow.cwl Branch/Commit ID: 337527c5512d2fb7644814bbfb4a338fd45ec907
	nestedworkflows.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/examples/nestedworkflows.cwl Branch/Commit ID: 20d664eff23e59aa57908345bfdb1ceeab3438f2
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 7b4b489474473c3d2d992a838b89632c2b97dc2c
	chipseq-header.cwl	https://github.com/datirium/workflows.git Path: metadata/chipseq-header.cwl Branch/Commit ID: 99840925c38f8a3d9cdf9d2c7f2f032e083bfd01
	steplevel-resreq.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/steplevel-resreq.cwl Branch/Commit ID: 58274ef14adbbf7e09dbf6e5170780179669078b
	Seed Search Compartments	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed.cwl Branch/Commit ID: 9144d08fa7f4e852498761481dceab477167fa65
	scatter-wf2.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf2.cwl Branch/Commit ID: 58274ef14adbbf7e09dbf6e5170780179669078b
	Super-enhancer post ChIP-Seq analysis Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff)	https://github.com/datirium/workflows.git Path: workflows/super-enhancer.cwl Branch/Commit ID: 282762f8bbaea57dd488115745ef798e128bade1
	wffail.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/wffail.cwl Branch/Commit ID: 58274ef14adbbf7e09dbf6e5170780179669078b