Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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hashsplitter-workflow.cwl
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https://github.com/uniqueg/cwl-example-workflows.git
Path: hashsplitter-workflow.cwl Branch/Commit ID: 2327df7559941163af3ab81f4df593484c738de6 |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb |
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exome alignment with qc, no bqsr, no verify_bam_id
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_exome_nonhuman.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f |
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taxonomy_check_16S
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https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: cc7fb3e5c534036638921878527a610fd5e1c2ab |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae |
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rnaediting2strands.workflow.cwl
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https://github.com/YeoLab/sailor.git
Path: cwl/rnaediting2strands.workflow.cwl Branch/Commit ID: 5eb7864dd3622552dc95a927d3eb6ccf5f107745 |
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cache_asnb_entries
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 001fab592188cb525afa1c4db6226b833faec106 |
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protein_evidence_mapping.cwl
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https://github.com/pvanheus/lukasa.git
Path: protein_evidence_mapping.cwl Branch/Commit ID: 0ed49ec431ed0fdb481231b47c19d939d29c58c6 |
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phase VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae |
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mutect panel-of-normals workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/panel_of_normals.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |