Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Exome QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome.cwl

Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9
workflow graph 04-peakcall-se.cwl

ATAC-seq 04 quantification - SE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl

Branch/Commit ID: 13826f526a99e151e9cf5f22e70bdcf4feea73f4
workflow graph 03-map-pe.cwl

ChIP-seq 03 mapping - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/03-map-pe.cwl

Branch/Commit ID: 13826f526a99e151e9cf5f22e70bdcf4feea73f4
workflow graph bwa_pe.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_pe.cwl

Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd
workflow graph 01-qc-pe.cwl

RNA-seq 01 QC - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/01-qc-pe.cwl

Branch/Commit ID: 13826f526a99e151e9cf5f22e70bdcf4feea73f4
workflow graph final-workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: final-workflow.cwl

Branch/Commit ID: 17a0f5681accd35ffb666c91295ad1579a53d0d7
workflow graph extract_amplicon_kit.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_amplicon_kit.cwl

Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae
workflow graph 03-map-pe-blacklist-removal.cwl

ATAC-seq 03 mapping - reads: PE - blacklist removal

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-pe-blacklist-removal.cwl

Branch/Commit ID: 13826f526a99e151e9cf5f22e70bdcf4feea73f4
workflow graph Create Genomic Collection for Bacterial Pipeline, ASN.1 input

https://github.com/ncbi/pgap.git

Path: genomic_source/wf_genomic_source_asn.cwl

Branch/Commit ID: 4b8d11048f1047140b337a2cac6503d80a22d683
workflow graph count-lines3-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl

Branch/Commit ID: 4a5fe26e32d244d95f9483c3edfc3df04f3e5f7b