Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae
	scatter-valuefrom-wf2.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/scatter-valuefrom-wf2.cwl Branch/Commit ID: f02557902989c749c9c2187c7045e340e2d76bfc
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb
	FASTQ to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 449bc7e45bb02316d040f73838ef18359e770268
	bams2gvcf.woBQSR_female_chrX_wXTR.cwl	https://github.com/ddbj/human-reseq.git Path: Workflows/bams2gvcf.woBQSR_female_chrX_wXTR.cwl Branch/Commit ID: a1c9cd63c80122d6a831059cdb73ec9a9455af6f
	Seurat Cluster Seurat Cluster ============== Runs filtering, integration, and clustering analyses for Cell Ranger Count Gene Expression or Cell Ranger Aggregate experiments.	https://github.com/datirium/workflows.git Path: workflows/seurat-cluster.cwl Branch/Commit ID: c6bfa0de917efb536dd385624fc7702e6748e61d
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 1e7aa9f0c34987ddafa35f9b1d2c77d99fafbdab
	Alignment without BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb
	adapter for sequence_align_and_tag Some workflow engines won't stage files in our nested structure, so parse it out here	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb