Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
oxog_varbam_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/svonworl/OxoG-Dockstore-Tools.git
Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: develop |
|
|
|
mug_refinement.cwl
|
https://github.com/bioexcel/virtualscreening.git
Path: cwl/mug_refinement.cwl Branch/Commit ID: master |
|
|
|
io-int-default-tool-and-wf.cwl
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/io-int-default-tool-and-wf.cwl Branch/Commit ID: master |
|
|
|
atac_encode_samples.cwl
|
https://github.com/ngs-mstb/micgent.git
Path: python/lib/MICGENT/data/cwl/atac_encode_samples.cwl Branch/Commit ID: master |
|
|
|
metrics-flow.cwl
Run metrics workflow |
https://github.com/sentieon/sentieon-cwl.git
Path: stage/metrics-flow.cwl Branch/Commit ID: master |
|
|
|
EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
|
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-single.cwl Branch/Commit ID: master |
|
|
|
chksum_seqval_wf_interleaved_fq.cwl
|
https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_seqval_wf_interleaved_fq.cwl Branch/Commit ID: 0.3.2 |
|
|
|
EMG assembly for paired end Illumina
|
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: 3039744 |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: master |
|
|
|
cnv_manta
CNV Manta calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/cnv_manta.cwl Branch/Commit ID: 1.0.9 |
