Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	03-map-pe.cwl ChIP-seq 03 mapping - reads: PE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/03-map-pe.cwl Branch/Commit ID: 517487e59d240c197fc91f08d20dadca97a9e121
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300
	Hello World Outputs a message using echo	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 46b7f9766d1bc8a4871474eee25ec730b4e173da
	extract_capture_kit.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/extract_capture_kit.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52
	pindel parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3
	workflow-phmmer-blast.cwl	https://github.com/ebi-wp/webservice-cwl.git Path: workflows/workflow-phmmer-blast.cwl Branch/Commit ID: b191ca3e4273b922bba6af4c1eacdaa86a5b62f4
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 66b5bc323dcd23e1b2c14bf4783babf0f15ca43b
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300
	exome alignment and somatic variant detection for cle purpose	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/cle_somatic_exome.cwl Branch/Commit ID: d2c2f2eb846ae2e9cdcab46e3bb88e42126cb3f5
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982