Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 33dcc054a8718edad26440f085d73b7c5d7b7871
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 7b5130d2408bce82ee15c666b37d931ef6f452e3
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb
	nestedworkflows.cwl	https://github.com/common-workflow-language/user_guide.git Path: _includes/cwl/22-nested-workflows/nestedworkflows.cwl Branch/Commit ID: da2f24a3dcb34ac658070a33a62a21d1370aa3cc
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/cancer-genomics-workflow.git Path: detect_variants/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: bc4a0f74082ffcf099977a1efac830d7e100bd66
	Aligning chipseq data of mouse	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr_mouse.cwl Branch/Commit ID: 8438316338e66823e1c9aca9f675b2bf33f2aa59
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae
	cache_test_workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: 4700fbee9a5a3271eef8bc9ee595619d0720431b