Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TransDecoder-v5-wf-2steps.cwl

Branch/Commit ID: e9bbe2917384efc75ba067db23612bc8e22f3f06
workflow graph extract_capture_kit.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_capture_kit.cwl

Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae
workflow graph 05-quantification.cwl

ChIP-seq - Quantification - samples: treatment

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/05-quantification.cwl

Branch/Commit ID: 33385c6a820a9d4d18cff6fc3a533ec8e3c11c6e
workflow graph env-wf3.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/env-wf3.cwl

Branch/Commit ID: 478c2ffc09fb189c4f36ccb82aad945b3db5f9b3
workflow graph predict-workflow.cwl

https://github.com/duke-gcb/imads-worker.git

Path: predict_service/predict-workflow.cwl

Branch/Commit ID: fffd8a4d1d3cf0045e66a3998dec70eb4e2cd003
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr.cwl

Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9
workflow graph kallisto_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/kallisto/single_end/kallisto_wf_se.cwl

Branch/Commit ID: 3affcd5588e273779b8b4084839ed0582ba2ea18
workflow graph 04-quantification-pe-stranded.cwl

RNA-seq 04 quantification

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/04-quantification-pe-stranded.cwl

Branch/Commit ID: dd2241dbbbc23abd91b5e6a18c139530e7ef8d2b
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/user_guide.git

Path: _includes/cwl/22-nested-workflows/1st-workflow.cwl

Branch/Commit ID: 39ed9658fa4ff80fff2e32bf481dbf64a8fc9529
workflow graph Create Genomic Collection for Bacterial Pipeline, ASN.1 input

https://github.com/ncbi/pgap.git

Path: genomic_source/wf_genomic_source_asn.cwl

Branch/Commit ID: 66b5bc323dcd23e1b2c14bf4783babf0f15ca43b