Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
![]() Path: zip_and_index_vcf.cwl Branch/Commit ID: develop |
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qiime2 rarefaction visualization
Alpha rarefaction plotting from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
![]() Path: subworkflows/qiime2-07-alpha-rarefaction.cwl Branch/Commit ID: develop |
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scatter-wf2.cwl
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![]() Path: tests/scatter-wf2.cwl Branch/Commit ID: master |
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exomeseq.cwl#exomeseq-01-preprocessing.cwl
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![]() Path: packed/exomeseq.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: exomeseq-01-preprocessing.cwl |
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qiime2 demux paired sequences
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![]() Path: packed/qiime2-step1-import-demux-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-02-demux-emp-paired.cwl |
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rnaediting1strand.cwl
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![]() Path: CWL-SINGULARITY-pipeline-building-code/cwl/rnaediting1strand.cwl Branch/Commit ID: 6f21086 |
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protein_evidence_mapping.cwl
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![]() Path: protein_evidence_mapping.cwl Branch/Commit ID: main |
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pipeline-pe-blacklist-removal.cwl
ATAC-seq pipeline - reads: PE - with blacklist removal |
![]() Path: v1.0/ATAC-seq_pipeline/pipeline-pe-blacklist-removal.cwl Branch/Commit ID: master |
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Gathered Downsample and HaplotypeCaller
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![]() Path: definitions/pipelines/gathered_downsample_and_recall.cwl Branch/Commit ID: master |
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chksum_seqval_wf_paired_fq.cwl
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![]() Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: v0.1.0 |