Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	merge-bam-parallel This workflow merge BAM files per condition in parallel	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/merge-bam-parallel.cwl Branch/Commit ID: 265440c63ab75d2451c90bcd116e725626e9a608
	cache_test_workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: 07ebbea2bdf97955060c1dd563580b386388519b
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	bact_get_kmer_reference	https://github.com/ncbi/pgap.git Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 7b5130d2408bce82ee15c666b37d931ef6f452e3
	count-lines1-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: 7dec97bb8f0bc2d9e9eb710faf41f2e98cc7cdda
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40
	allele-process-strain.cwl	https://github.com/Barski-lab/workflows.git Path: subworkflows/allele-process-strain.cwl Branch/Commit ID: 378f693ebfb3edf9f589007e366fec1195ec1464
	conflict.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/conflict.cwl Branch/Commit ID: 520acbfb82455c4bdabd5f2ea24842804e1c9f58 Packed ID: main
	FASTQ to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	WGS and MT analysis for fastq files rna / protein - qc, preprocess, filter, annotation, index, abundance	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: 9aba38fd1569287b7256ace7163ac84320909f8a