Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	03-local-deconv-cor.cwl	https://github.com/PNNL-CompBio/decomprolute.git Path: localData/03-local-deconv-cor.cwl Branch/Commit ID: 6351764c74a44fc4fa2042d31c0cedde5a5bdbe9
	adapter for sequence_align_and_tag Some workflow engines won't stage files in our nested structure, so parse it out here	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: c7c379948c02ba8f048d157f06eb903b1bda9894
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	trimming_and_qc.cwl	https://github.com/suecharo/sapporo_test_workflows.git Path: qc_and_trimming/cwl/trimming_and_qc.cwl Branch/Commit ID: fec3bccbcd637bcc84a0ad3aa2f20a7431445645
	workflow.cwl	https://github.com/imilos/silicofcm-workflows.git Path: pak-fs-patient/workflow.cwl Branch/Commit ID: 92d00c0d6fd5d462606bbaf0a8a9fc039d3d2c83
	workflow.cwl	https://github.com/imilos/silicofcm-workflows.git Path: pak-fs-multiple-patients/workflow.cwl Branch/Commit ID: 92d00c0d6fd5d462606bbaf0a8a9fc039d3d2c83
	workflow.cwl	https://github.com/imilos/silicofcm-workflows.git Path: pak-fis/workflow.cwl Branch/Commit ID: 92d00c0d6fd5d462606bbaf0a8a9fc039d3d2c83
	workflow.cwl	https://github.com/imilos/silicofcm-workflows.git Path: alya-lv-wedge/workflow.cwl Branch/Commit ID: 92d00c0d6fd5d462606bbaf0a8a9fc039d3d2c83