Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bam to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	kmer_cache_store	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86
	BAM to BEDPE Comvert BAM to BEDPE and compress the output	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/File-formats/bamtobedpe-gzip.cwl Branch/Commit ID: 06501cfc314e36749043431e67c2990966b452e0
	Nested workflow example	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/nested.cwl Branch/Commit ID: c7c379948c02ba8f048d157f06eb903b1bda9894
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: bc0f1f147231c759fb2d5ff99f41b2667a5588ad
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb
	workflow.cwl	https://github.com/imilos/silicofcm-workflows.git Path: ultrasound-m_mode-parametric/workflow.cwl Branch/Commit ID: 92d00c0d6fd5d462606bbaf0a8a9fc039d3d2c83
	bam to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	Bisulfite QC tools	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416