Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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rnaseq-alignment-quantification
This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/RNA-Seq/rnaseq-alignment-quantification.cwl Branch/Commit ID: master |
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workflow_mc.cwl
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https://github.com/mr-c/cwltests.git
Path: cwl/workflow_mc.cwl Branch/Commit ID: pack_test |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: ca6ca613 |
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EMG pipeline v3.0 (paired end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: 3f85843 |
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Dockstore.cwl
This is a description |
https://github.com/kathy-t/test-authors.git
Path: Dockstore.cwl Branch/Commit ID: orcidAuthor |
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create_snap_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: create_snap_and_analyze.cwl Branch/Commit ID: bb023f9 |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: f914942 |
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conflict-wf.cwl#collision
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/conflict-wf.cwl Branch/Commit ID: main Packed ID: collision |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: downsample_and_recall |
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05-quantification.cwl
ChIP-seq - Quantification - samples: treatment |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ChIP-seq_pipeline/05-quantification.cwl Branch/Commit ID: master |
