Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	nestedworkflows.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/examples/nestedworkflows.cwl Branch/Commit ID: ec2cf2da6c31ffedf827a0fb213b5204e172f510
	nestedworkflows.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/examples/nestedworkflows.cwl Branch/Commit ID: 0e98de8f692bb7b9626ed44af835051750ac20cd
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 66b5bc323dcd23e1b2c14bf4783babf0f15ca43b
	02-trim-pe.cwl ChIP-seq 02 trimming - reads: PE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/02-trim-pe.cwl Branch/Commit ID: e019c548a0bc2f17b13365abd213259887069978
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/wgs_alignment.cwl Branch/Commit ID: bcc6adaf15035f5ce6fc851e27b1173b0fd20c1c
	transform.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/fastq_readgroup_stats/transform.cwl Branch/Commit ID: b2f7a697e08220234062a9cf558ba169d255b4a4
	wffail.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/wffail.cwl Branch/Commit ID: ec2cf2da6c31ffedf827a0fb213b5204e172f510
	Generate genome index bowtie Workflow makes indices for [bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016). Executes `bowtie-index` to generate indices requires genome [FASTA](http://zhanglab.ccmb.med.umich.edu/FASTA/) file as input, returns results as a directory	https://github.com/datirium/workflows.git Path: workflows/bowtie-index.cwl Branch/Commit ID: 4106b7dc96e968db291b7a61ecd1641aa3b3dd6d
	01-qc-se.cwl ChIP-seq 01 QC - reads: SE	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/01-qc-se.cwl Branch/Commit ID: c50b80e9b0eaaf4613f9feca44b3463bbfd288d5
	gathered exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/gathered_somatic_exome.cwl Branch/Commit ID: bcc6adaf15035f5ce6fc851e27b1173b0fd20c1c