Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
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exome alignment with qc, no bqsr, no verify_bam_id
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome_alignment_mouse.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300 |
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bwa_se.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_se.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533 |
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bwa_pe.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_pe.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52 |
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Raw sequence data to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8 |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8 |
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Raw sequence data to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075 |
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Align reference proteins plane complete workflow
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942 |
