Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 3a822294da63b4e19446a285e2fef075e23cf3d0 |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325 |
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tt_blastn_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: f18c1dce463509170ee3bf2844d5a3637ff706f5 |
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SSU-from-tablehits.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: f993cada89d2c6f7480a0d56baa7836a361b1f3a |
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Unaligned bam to sorted, markduped bam
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
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bam to trimmed fastqs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a |
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extract_gencoll_ids
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https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416 |
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kmer_gc_extract_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_gc_extract_wnode.cwl Branch/Commit ID: f18c1dce463509170ee3bf2844d5a3637ff706f5 |
