Explore Workflows

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-01-preprocessing.cwl

Branch/Commit ID: 3318d9fcfd153ad3e9744d5e495d9c39aee20916

https://github.com/kids-first/kf-alignment-workflow.git

Path: workflows/kfdrc_bwamem_subwf.cwl

Branch/Commit ID: 44f7dbae05ae5e845ce52b29b44a65bcbb78db89

abundace profiles from annotated files, for protein and/or rna

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/abundance.workflow.cwl

Branch/Commit ID: 1b1bb901b849b32cbfc4cb58d736bb617d514319

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl

Branch/Commit ID: 596aab620489cd2611f4bc1d9a4fc914ddf34514

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-alignment.cwl

Branch/Commit ID: 6e9274ca22e75e3359b5ff74c6657f300138bb95

This workflow normalizes clip aligned reads against a size-matched input sample. Then, an entropy score is calculated for each peak found.

https://github.com/YeoLab/merge_peaks.git

Path: cwl/wf_input_norm_and_entropy.cwl

Branch/Commit ID: f523a4c9594b64dc8bc0b1bd10759e36bfcc4798

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-6.cwl

Branch/Commit ID: f3f070b4c0cce2cbcdab78c10f2f88abfb78586a

https://github.com/Kevin-Fang/recall-veritas-pgp.git

Path: unzip/unzipBAMs.cwl

Branch/Commit ID: 088ef02210e3b71874a54ee54cba38514735e73d

Reverse the lines in a document, then sort those lines.

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/revsort.cwl

Branch/Commit ID: 596aab620489cd2611f4bc1d9a4fc914ddf34514

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl

Branch/Commit ID: d7481d03fa4b5b4630392540f598acfb100b421d