Explore Workflows

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/io-int-default-wf.cwl

Branch/Commit ID: main

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/sum-wf-noET.cwl

Branch/Commit ID: master

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/chipseq.cwl

Branch/Commit ID: downsample_and_recall

The BD Rhapsody™ assays are used to create sequencing libraries from single cell transcriptomes. After sequencing, the analysis pipeline takes the FASTQ files and a reference file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file.

https://github.com/longbow0/cwl.git

Path: v1.8/rhapsody_targeted_1.8.cwl

Branch/Commit ID: master

Packed ID: main

Workflow without inputs.

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/no-inputs-wf.cwl

Branch/Commit ID: master

Derive trigger thresholds from rate scans taking into account night-sky background illumination and cosmic-ray triggered events.

https://github.com/gammasim/workflows.git

Path: workflows/SetTriggerThresholdsFromRateScan.cwl

Branch/Commit ID: main

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines7-wf.cwl

Branch/Commit ID: master

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-blast-clustalo-phylogeny.cwl

Branch/Commit ID: master

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/steps/sc_atac_seq_initial_analysis.cwl

Branch/Commit ID: c338cd3

https://github.com/NCI-GDC/gdc-rnaseq-cwl.git

Path: rnaseq-star-align/subworkflows/rnaseq_processing/rnaseq_metrics_workflow.cwl

Branch/Commit ID: master