Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	cache_asnb_entries	https://github.com/ncbi/pgap.git Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 3897218b16b30a933beecd60a98a300d677207d8
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a
	kf_alignment_fq_input_wf.cwl	https://github.com/kids-first/kf-alignment-workflow.git Path: workflows/kf_alignment_fq_input_wf.cwl Branch/Commit ID: 2afe4de3fe046623715bde6f58b218ca063f5a0c
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf
	umi duplex alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405
	exomeseq-03-organizedirectories.cwl	https://github.com/Duke-GCB/bespin-cwl.git Path: subworkflows/exomeseq-03-organizedirectories.cwl Branch/Commit ID: e82f3a71183048dd6700ec6725ee526ac1a95238
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a