Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Raw sequence data to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	infuse_pipeline.cwl	https://github.com/cancerit/cgpRna.git Path: cwls/infuse_pipeline.cwl Branch/Commit ID: 177d01c89c1d8d3f2fe09532c8118f4c35e49f4e
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: a1533848372b4dd8237c45df91fe26b620113e38
	Super-enhancer post ChIP-Seq analysis Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff)	https://github.com/datirium/workflows.git Path: workflows/super-enhancer.cwl Branch/Commit ID: 730b40bc403263b724399a952c0f3e2d28f13519
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_md5checksums/workflow.cwl Branch/Commit ID: a1533848372b4dd8237c45df91fe26b620113e38
	count-lines13-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: 9a23706ec061c5d2c02ff60238d218aadf0b5db9
	03-map-pe.cwl STARR-seq 03 mapping - reads: PE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/STARR-seq_pipeline/03-map-pe.cwl Branch/Commit ID: 517487e59d240c197fc91f08d20dadca97a9e121
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_dispatch/2blat/workflow.cwl Branch/Commit ID: a1533848372b4dd8237c45df91fe26b620113e38