Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325
	cram_to_bam workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	process VCF workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: be465ad19b07378f3f863f2c4e0019b420c859f2
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 844c10a4466ab39c02e5bfa7a210c195b8efa77a
	assm_assm_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f
	mosdepth_to_coverage_QC.cwl	https://github.com/YinanWang16/tso500-ctdna-post-processing.git Path: cwl/workflows/mosdepth_to_coverage_QC.cwl Branch/Commit ID: 08f855a08ca02b15c8d3540b28bb17b4f85a371a
	02-trim-se.cwl RNA-seq 02 trimming - reads: SE	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/02-trim-se.cwl Branch/Commit ID: ebd63f705d0fde7290e42c8300d5420c25cfbfe3
	04-quantification-se-revstranded.cwl RNA-seq 04 quantification	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/04-quantification-se-revstranded.cwl Branch/Commit ID: ebd63f705d0fde7290e42c8300d5420c25cfbfe3