Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	fusion_simulation_workflow.cwl Fusion Simulation Workflow	https://github.com/Sage-Bionetworks/rnaseqSim.git Path: workflow/fusion_simulation_workflow.cwl Branch/Commit ID: master
	validate_interleaved_fq.cwl	https://github.com/cancerit/workflow-seq-import.git Path: cwls/validate_interleaved_fq.cwl Branch/Commit ID: 0.2.3
	pipeline.cwl	https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git Path: pipeline.cwl Branch/Commit ID: master
	wf_get_peaks_se.cwl	https://github.com/YeoLab/eclip.git Path: cwl/wf_get_peaks_se.cwl Branch/Commit ID: master
	BD Rhapsody™ Targeted Analysis Pipeline The BD Rhapsody™ assays are used to create sequencing libraries from single cell transcriptomes. After sequencing, the analysis pipeline takes the FASTQ files and a reference file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file.	https://github.com/longbow0/cwl.git Path: v1.8/rhapsody_targeted_1.8.cwl Branch/Commit ID: master Packed ID: main
	bacterial_orthology	https://github.com/ncbi/pgap.git Path: bacterial_orthology/wf_bacterial_orthology.cwl Branch/Commit ID: master
	rnaseq-se-dutp.cwl Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-se-dutp.cwl Branch/Commit ID: master
	htseq_count_workflow.cwl	https://github.com/nci-gdc/htseq-cwl.git Path: workflows/htseq_count_workflow.cwl Branch/Commit ID: master
	fastqSE2bam.cwl	https://github.com/ddbj/human-reseq.git Path: Workflows/fastqSE2bam.cwl Branch/Commit ID: master
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/revsort.cwl Branch/Commit ID: main

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