Explore Workflows
View already parsed workflows here or click here to add your own
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fusion_simulation_workflow.cwl
Fusion Simulation Workflow |
Path: workflow/fusion_simulation_workflow.cwl Branch/Commit ID: master |
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validate_interleaved_fq.cwl
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Path: cwls/validate_interleaved_fq.cwl Branch/Commit ID: 0.2.3 |
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pipeline.cwl
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Path: pipeline.cwl Branch/Commit ID: master |
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wf_get_peaks_se.cwl
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Path: cwl/wf_get_peaks_se.cwl Branch/Commit ID: master |
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BD Rhapsody™ Targeted Analysis Pipeline
The BD Rhapsody™ assays are used to create sequencing libraries from single cell transcriptomes. After sequencing, the analysis pipeline takes the FASTQ files and a reference file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file. |
Path: v1.8/rhapsody_targeted_1.8.cwl Branch/Commit ID: master Packed ID: main |
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bacterial_orthology
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Path: bacterial_orthology/wf_bacterial_orthology.cwl Branch/Commit ID: master |
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rnaseq-se-dutp.cwl
Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file. |
Path: workflows/rnaseq-se-dutp.cwl Branch/Commit ID: master |
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htseq_count_workflow.cwl
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Path: workflows/htseq_count_workflow.cwl Branch/Commit ID: master |
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fastqSE2bam.cwl
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Path: Workflows/fastqSE2bam.cwl Branch/Commit ID: master |
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revsort.cwl
Reverse the lines in a document, then sort those lines. |
Path: tests/wf/revsort.cwl Branch/Commit ID: main |
