Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	03-map-se.cwl ATAC-seq 03 mapping - reads: SE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl Branch/Commit ID: 3a4314c66c1eb090e656af5a0d388cec87d65318
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: c235dc6d623879a6c4f5fb307f545c9806eb2d23
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: c235dc6d623879a6c4f5fb307f545c9806eb2d23
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: c235dc6d623879a6c4f5fb307f545c9806eb2d23
	Add snv and indel bam-readcount files to a vcf	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: c235dc6d623879a6c4f5fb307f545c9806eb2d23
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: c235dc6d623879a6c4f5fb307f545c9806eb2d23
	unix_align_workflow.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: tools/unix/unix_align_workflow.cwl Branch/Commit ID: 8edf6a5e4e7790434ad0742e50d0c97a5d0bb846
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993
	02-trim-pe.cwl ATAC-seq 02 trimming - reads: PE	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/02-trim-pe.cwl Branch/Commit ID: 0c7a51100908034e82ac008ac206d94ff8b011cd