Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942
	amplicon_metrics.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/amplicon_metrics.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 8e00678051e8e11fe2798175401bce04c7eeef19
	module-5	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-5.cwl Branch/Commit ID: 08e592a521057cef4982c1d4111d2e3b30ea3f2f
	transform.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/transform.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8
	count-lines13-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/revsort.cwl Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383