Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: a3e26136043c03192c38c335316d2d36e3e67478 |
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merge and annotate svs with population allele freq and vep
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: a3e26136043c03192c38c335316d2d36e3e67478 |
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default-dir5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-dir5.cwl Branch/Commit ID: fec7a10466a26e376b14181a88734983cfb1b8cb |
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xenbase-fastq-bowtie-bigwig-se-pe.cwl
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https://github.com/datirium/workflows.git
Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl Branch/Commit ID: ae2b231562822ed66b8e35e5452ae7f012416b2a |
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gunzip-workflow.cwl
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https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git
Path: demo_workflow4/gunzip-workflow.cwl Branch/Commit ID: abbb81823195194bb8f1a9ddc5ba8efc2be86cdf |
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SV filtering workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_sv_vcf.cwl Branch/Commit ID: a3e26136043c03192c38c335316d2d36e3e67478 |
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index sim seq
create sorted / filtered similarity file with feature sequences, and index by md5 |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/index_sim_seq.workflow.cwl Branch/Commit ID: f906212e2c9a88280ae36545e5422f25752aa8f4 |
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abundance
abundace profiles from annotated files, for protein and/or rna |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/abundance.workflow.cwl Branch/Commit ID: f906212e2c9a88280ae36545e5422f25752aa8f4 |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2 |
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merge and annotate svs with population allele freq and vep
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 8cee1920920ed73384fb3ab74272da9c92a20cf2 |
