Explore Workflows

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines11-null-step-wf-noET.cwl

Branch/Commit ID: main

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-paired.cwl

Branch/Commit ID: master

Workflow to find hotspot VAFs from duplex (for Tumor sample) and unfiltered (for Normal sample) pileups. These inputs are all required to be sorted in the same order: sample_ids patient_ids sample_classes unfiltered_pileups duplex_pileups

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/subworkflows/find_hotspots_in_normals.cwl

Branch/Commit ID: master

https://github.com/yyoshiaki/VIRTUS.git

Path: workflow/VIRTUS.PE.singlevirus.cwl

Branch/Commit ID: master

PGAP pipeline for external usage, powered via containers

https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: dev

https://github.com/mr-c/cwltests.git

Path: cwl/packed.cwl

Branch/Commit ID: pack_test

Packed ID: main

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/sum-wf.cwl

Branch/Commit ID: master

A workflow that aligns a fasta file and provides statistics on the SAM file

https://github.com/dockstore/bcc2020-training.git

Path: cwl-training/exercise3/solution/align_and_metrics.cwl

Branch/Commit ID: master

https://github.com/CWL-FLOps/DecentralizedFL-CWL.git

Path: CWL_Workflow/decentralizedFL.cwl

Branch/Commit ID: main

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/word-mapping-dir.cwl

Branch/Commit ID: master

Packed ID: word-mapping-wf.cwl