Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	download_check.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/utils/download_check.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b
	download_fastq.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/utils/download_fastq.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b
	star_samtools_featurecounts_edger.cwl	https://github.com/rawgene/cwl.git Path: workflows/star_samtools_featurecounts_edger.cwl Branch/Commit ID: 54adf7fcfbf48c9cc4cfcf384e04eede39b5e5f6
	alignment_bwa_mem_prod.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem_prod.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b
	upload_results.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/utils/upload_results.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf
	sec-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf.cwl Branch/Commit ID: cf9d7cdefa6dfb3b678636da02bc55b6108c04ac
	Unaligned bam to sorted, markduped bam	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263
	harmonization_bwa_mem_prod.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem_prod.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b
	haplotypecaller.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/cwl/workflows/variant_calling/haplotypecaller.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b