Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Bisulfite QC tools
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
Exome QC workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
bam to trimmed fastqs
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
Detect DoCM variants
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
bgzip and index VCF
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
Merge, annotate, and generate a TSV for SVs
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
bam to trimmed fastqs and biscuit alignments
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
joint genotyping for trios or small cohorts
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/joint_genotype.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
|
|
|
bam to trimmed fastqs and HISAT alignments
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 174f3b239018328cec1d821947438b457552724c |
