Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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workflow-fetch-hmmscan.cwl
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![]() Path: workflows/workflow-fetch-hmmscan.cwl Branch/Commit ID: 40d46a0685a85895f597cbac7b147fd95d22c6a3 |
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Transcripts annotation workflow
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![]() Path: workflows/TranscriptsAnnotation-i5only-wf.cwl Branch/Commit ID: e9bbe2917384efc75ba067db23612bc8e22f3f06 |
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Transcriptome assembly workflow (paired-end version)
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![]() Path: workflows/TranscriptomeAssembly-wf.paired-end.cwl Branch/Commit ID: e9bbe2917384efc75ba067db23612bc8e22f3f06 |
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TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)
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![]() Path: workflows/TransDecoder-v5-wf-2steps.cwl Branch/Commit ID: e9bbe2917384efc75ba067db23612bc8e22f3f06 |
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extract_capture_kit.cwl
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![]() Path: workflows/bamfastq_align/extract_capture_kit.cwl Branch/Commit ID: 0d3fdddeae5a398e476d91aa98766965866d8eae |
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05-quantification.cwl
ChIP-seq - Quantification - samples: treatment |
![]() Path: v1.0/ChIP-seq_pipeline/05-quantification.cwl Branch/Commit ID: 33385c6a820a9d4d18cff6fc3a533ec8e3c11c6e |
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env-wf3.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/env-wf3.cwl Branch/Commit ID: 478c2ffc09fb189c4f36ccb82aad945b3db5f9b3 |
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predict-workflow.cwl
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![]() Path: predict_service/predict-workflow.cwl Branch/Commit ID: fffd8a4d1d3cf0045e66a3998dec70eb4e2cd003 |
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Unaligned BAM to BQSR and VCF
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![]() Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9 |
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kallisto_wf_se.cwl
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![]() Path: workflows/kallisto/single_end/kallisto_wf_se.cwl Branch/Commit ID: 3affcd5588e273779b8b4084839ed0582ba2ea18 |