Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wgs alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: 5a4fed24f01f6d7c7ce1f595b272d82d97d4f9bd |
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etl.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/checkout_workflow/etl.cwl Branch/Commit ID: d6c0acb0a5e8546dc96463c9d184ca96548e22b3 |
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alignment_bwa_mem.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem.cwl Branch/Commit ID: 39ddc4b79dc93076787046f591225dc7ca3100ce |
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etl.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/etl.cwl Branch/Commit ID: d6c0acb0a5e8546dc96463c9d184ca96548e22b3 |
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sec-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4 |
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word-mapping-dir.cwl#main
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/word-mapping-dir.cwl Branch/Commit ID: 66e1aecc1ed94e00c03c4d8d9e18ddb4bc3e6d2e Packed ID: main |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: ddb49a0951d9ad537269d7db3fe8f904495a8bf4 |
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fastq_clean_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/fastq_clean_se.cwl Branch/Commit ID: d6c0acb0a5e8546dc96463c9d184ca96548e22b3 |
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word-mapping-dir.cwl#word-mapping-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/word-mapping-dir.cwl Branch/Commit ID: 66e1aecc1ed94e00c03c4d8d9e18ddb4bc3e6d2e Packed ID: word-mapping-wf.cwl |
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etl.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/etl.cwl Branch/Commit ID: 017c7572ea309c7d5b34bcc9bc1bdafbe47cb515 |
