Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095
	03-map-se-blacklist-removal.cwl ATAC-seq 03 mapping - reads: SE - blacklist removal	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/03-map-se-blacklist-removal.cwl Branch/Commit ID: 517487e59d240c197fc91f08d20dadca97a9e121
	assembly.cwl	https://github.com/vetscience/Assemblosis.git Path: Run/assembly.cwl Branch/Commit ID: c498607f21124d2f3787a21c0d554375799170a7
	cwlsite.cwl	https://github.com/common-workflow-language/cwl-website.git Path: site/cwlsite.cwl Branch/Commit ID: 0ca6132e45e02571d575a8c113cdec98b298041d
	genomel_cohort_genotyping.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/genomel_cohort_genotyping.cwl Branch/Commit ID: 3b9d07ff1dd10e323fbba33026b888b3a269136b
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 40097e1ed094c5b42b68f3db2ff2cbe78c182479
	04-quantification-pe-revstranded.cwl RNA-seq 04 quantification	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/04-quantification-pe-revstranded.cwl Branch/Commit ID: 517487e59d240c197fc91f08d20dadca97a9e121
	fastqtosam_pe.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/fastqtosam/fastqtosam_pe.cwl Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52
	echo-wc.workflowstep.cwl	https://github.com/NLeSC/scriptcwl.git Path: tests/data/echo-wc.workflowstep.cwl Branch/Commit ID: a49148fed2242bfb4d45f0ff44ea52e728db79e9
	md5sum-workflow.cwl	https://github.com/dockstore-testing/md5sum-checker.git Path: md5sum/md5sum-workflow.cwl Branch/Commit ID: 728a681c52686fec4a148d75d98ee60ddecbaf22