Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	samtools_view_sam2bam	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/samtools_view_sam2bam.cwl Branch/Commit ID: 1.1.3
	transform.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/transform.cwl Branch/Commit ID: 1.0
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/pipelines/alignment_exome_mouse.cwl Branch/Commit ID: downsample_and_recall
	main-giab-joint.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: giab-joint/giab-joint-workflow/main-giab-joint.cwl Branch/Commit ID: master
	trimmed_fastq Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed)	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl Branch/Commit ID: 1.0.7
	WF5201.cwl	https://github.com/Marco-Salvi/dtc51.git Path: WF5201.cwl Branch/Commit ID: main
	wgs alignment with qc	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: low-vaf
	Perform Molecular Atmospheric Calibration This workflow performs calibrations, related to the molecular content of the atmosphere. To be updated...	https://gitlab.cta-observatory.org/cta-computing/dpps/dpps-workflows.git Path: workflows/calibpipe/AtmosphericCalibrations/MolecularAtmosphere/uc-dpps-cp-110.cwl Branch/Commit ID: main
	alignment for mouse with qc	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/pipelines/alignment_wgs_mouse.cwl Branch/Commit ID: downsample_and_recall
	04-quantification-pe-stranded.cwl RNA-seq 04 quantification	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/04-quantification-pe-stranded.cwl Branch/Commit ID: master

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