Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: e0b3c76e38630fb6234414b5adebfb6a4fb23117
	Seed Search Compartments	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed.cwl Branch/Commit ID: 1bf7dc7b03ea3c64e54375cc5c3767849a801000
	module-1-scatter-chunk	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-1.scatter.chunk.cwl Branch/Commit ID: 49d7810b6446d6aadfcdbb6b5deee9f02ad749c2
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_md5checksums/workflow.cwl Branch/Commit ID: ddb4503363a810b7eaaaa4d8796e722f94cb355b
	module-1-scatter-chunk	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-1.scatter.chunk.cwl Branch/Commit ID: 08e592a521057cef4982c1d4111d2e3b30ea3f2f
	Per-chromosome pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 5677d6df78453e62d2e78ab485f216feaef91681
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1
	exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3
	exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc
	exome alignment and somatic variant detection for cle purpose	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/cle_somatic_exome.cwl Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba