Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Filter single sample sv vcf from depth callers(cnvkit/cnvnator)	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sv_depth_caller_filter.cwl Branch/Commit ID: 295e7b7f51727c0f2d6cc86ce817449b2e8dba3c
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 295e7b7f51727c0f2d6cc86ce817449b2e8dba3c
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 252e7214ac64cb1128881e76743013e61bc7ec38
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 295e7b7f51727c0f2d6cc86ce817449b2e8dba3c
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: f77a920bcc73f6cfdb091eed75a149d02cd8a263
	Seed Protein Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: 252e7214ac64cb1128881e76743013e61bc7ec38
	05-quantification-with-control.cwl ChIP-seq - Quantification - samples: treatment and control	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/ChIP-seq_pipeline/05-quantification-with-control.cwl Branch/Commit ID: 21b15e76119981cb564bc3927456ffc6c473015f
	Seed Protein Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_seed_1.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf
	multiple.cwl	https://github.com/gijzelaerr/spiel.git Path: multiple.cwl Branch/Commit ID: 8622ab30f9bb8bc26c83bde1ac7ffcf55cf187c7
	Non-Coding Bacterial Genes	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 252e7214ac64cb1128881e76743013e61bc7ec38