Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	gp_makeblastdb	https://github.com/ncbi/pgap.git Path: progs/gp_makeblastdb.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: ae75b938e6e8ae777a55686bbacad824b3c6788c
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: 7f9dfad8e45ca096ae738cff646195b2b1ba7d7f
	Detect Docm variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: e2a34d2b8c406db9aed8e49e8bdcf36f51444379
	Immunotherapy Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/immuno.cwl Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	count-lines12-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines12-wf.cwl Branch/Commit ID: 46b7f9766d1bc8a4871474eee25ec730b4e173da