Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wesp2.cwl
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https://github.com/cr-ste-justine/chujs-alignment-workflow.git
Path: workflows/wesp2.cwl Branch/Commit ID: dev |
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qiime2 create phylogenetic tree
Generate a tree for phylogenetic diversity analyses from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/duke-gcb/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-05-phylogeny.cwl |
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count-lines12-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines12-wf.cwl Branch/Commit ID: main |
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gatk4W.cwl
Author: AMBARISH KUMAR er.ambarish@gmail.com & ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for genomic variant detection using GATK4. It is hoped to be effective and useful for getting SARS-CoV-2 genome variants. It uses Illumina RNASEQ reads and genome sequence. |
https://github.com/ambarishK/bio-cwl-tools.git
Path: gatk4W.cwl Branch/Commit ID: release |
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pangenome-generate.cwl
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https://github.com/arvados/bh20-seq-resource.git
Path: workflows/pangenome-generate/pangenome-generate.cwl Branch/Commit ID: master |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
https://github.com/ncbi/pgap.git
Path: wf_common.cwl Branch/Commit ID: test |
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module-2.cwl
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https://github.com/andurill/ACCESS-Pipeline.git
Path: workflows/module-2.cwl Branch/Commit ID: master |
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io-int-default-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/io-int-default-wf.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 3f85843 |
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Process cnvkit outputs
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https://github.com/ChrisMaherLab/PACT.git
Path: subworkflows/process_cnvkit_results.cwl Branch/Commit ID: master |
