Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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qiime2 explore sample taxonomic composition
Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-08-taxonomic-analysis.cwl |
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sc_atac_seq_initial_analysis.cwl
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https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: sc-atac-seq-pipeline/steps/sc_atac_seq_initial_analysis.cwl Branch/Commit ID: 68e0cc1 |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: ada7831 |
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vardictSomaticVariantCaller_v0_1_0.cwl
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https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/vardictSomaticVariantCaller_v0_1_0.cwl Branch/Commit ID: master |
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sgseq_cwl.cwl
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https://github.com/rdocking/sgseq_cwl.git
Path: cwl/sgseq_cwl.cwl Branch/Commit ID: master |
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retrieve metadata from Zenodo community
For a given Zenodo community, retrieve its repository records as Zenodo JSON and (eventually) schema.org JSON-LD and DataCite v4 XML. |
https://github.com/stain/ro-index-paper.git
Path: code/data-gathering/workflows/zenodo-records.cwl Branch/Commit ID: master |
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Seed Search Compartments
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_seed.cwl Branch/Commit ID: dev |
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dynresreq-workflow-stepdefault.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/dynresreq-workflow-stepdefault.cwl Branch/Commit ID: master |
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import_include_test.cwl
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https://github.com/wshands/CWL1.2Test.git
Path: import_include_test.cwl Branch/Commit ID: develop |
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main-somatic.cwl
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https://github.com/FarahZKhan/bcbio_test_cwl.git
Path: somatic/somatic-workflow/main-somatic.cwl Branch/Commit ID: master |
