Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Raw sequence data to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533 |
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process VCF workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993 |
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Per-chromosome pindel
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993 |
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Unaligned BAM to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: d2c2f2eb846ae2e9cdcab46e3bb88e42126cb3f5 |
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functional-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/checker_wf/functional-wf.cwl Branch/Commit ID: ecdfe1ee769d05790f70ac87a711131f441f3753 |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: d2c2f2eb846ae2e9cdcab46e3bb88e42126cb3f5 |
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bam-bedgraph-bigwig.cwl
Workflow converts input BAM file into bigWig and bedGraph files |
https://github.com/Barski-lab/workflows.git
Path: subworkflows/bam-bedgraph-bigwig.cwl Branch/Commit ID: d93911fa135411fbab99513e4a672056b30490ce |
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kfdrc_bwamem_subwf.cwl
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https://github.com/kids-first/kf-alignment-workflow.git
Path: workflows/dev/ultra-opt/kfdrc_bwamem_subwf.cwl Branch/Commit ID: 9e983f1d09892dfc8c17bcb6ff59c075c86b46a6 |
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rna annotation
RNAs - predict, cluster, identify, annotate |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/rna-annotation.workflow.cwl Branch/Commit ID: 7797879b801042984b5ae651754815fc3f77ea41 |
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sec-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383 |
